Handbook of comparative genomics
Handbook of comparative genomics principles and methodology Cecilia Saccone, Graziano Pesole
Publisher: New York : Wiley-Liss, c2003.
ISBN: 0471722723
DDC: 572.8
LCC: QH447
Edition: 047139128X (cloth : alk. paper)
Notes:
Made available through Wiley InterScience online books.
Includes bibliographical references (p. 377-422) and index.
I.Genome Features --1.Prokaryotes --Morphology and Classification
--Genome Shape and Size --Gene Content and Organization --Base
Composition --Codon Use --Replication and Expression --2.Eukaryotes
--Classification and Time Scale --Genome Shape and Size --Base
Composition --Replication, Repair, and Recombination --Gene
Expression --Completely Sequenced Eukaryotic Genomes --3.Organelles
--Mitochondria --Chloroplasts and Other Plastids --II.Methodologies
--4.Molecular Biology Techniques for Genomics --Genome DNA Sequencing
--Analysis of the Transcriptome --Analysis of the Proteome
--5.Biological Databases in the Genomic ERA --Primary and Specialized
Databases --Database Structures --Linked Databases and Database
Interoperability --Database Annotation --Retrieval Systems
--Nucleotide Databases --Protein Databases --
Other Protein Databases --Genomic Databases and Resources --Gene
Databases and Resources --Transcriptome Databases --Metabolism
Databases --Mutation Databases --Mitochondrial Databases and
Resources --6.Computational Methods for the Analysis of Genome
Sequence Data --Dot-Plot Matrix --Sequence Pairwise Alignment
--Database Searching --Multiple Alignment --Alignment Profiles to
Recognize Distantly Related Protein or Protein Modules --Methods for
Sequence Assembly --Linguistic Analysis of Biosequences --Prediction
of RNA Secondary Structures --Protein Sequence Analysis
--Evolutionary and Phylogenetic Analysis --III.Comparative Genomics
--7.Molecular Evolution --Evolution of Genome Size --Role of Base
Composition in Evolution --Evolution of the Prokaryotic Genome --From
Prokaryotes to Eukaryotes --From Unicellular to Multicellular State
--
Evolution of the Nuclear Genome --8.Molecular Phylogeny --Molecular
Clock --Similarity Measure: Orthology Versus Paralogy --Molecular
Phylogeny in the Genomics Era --Interrelationships between Distant
Taxa: The Tree of Life --Phylogeny of Metazoans --App.URLs Cited in
the Text.
Electronic reproduction.[New York]: J. Wiley and Sons,[200u]Mode of
access: World Wide Web.
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